The worst part, it won't even recognize that it just replaced your new and shiny LAMr29 with an old LAMr23 and will continue to show it as up to date.
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Not sure how Minion works there but I guess it stores the updated version from the server into the Minion.xml and that's it (today).
Couldn't Minion 3/4 scan the addons directory after finishing an update/an update batch for multiple addons and read the manifest txt files to check if the versions in there are the same as the Minion server's version of the addon/library? Something like a check after update again.
Outdated addons or libs should then be shown the "Update" button again.